BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017C03LP1|AL427131
(1003 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1238 1929 0.0
>3x_Contig1238
Length = 5289
Score = 1929 bits (972), Expect = 0.0
Identities = 979/980 (99%), Gaps = 1/980 (0%)
Strand = Plus / Plus
Query: 13 atccagatggaagatgcattagattattgactactgacgaaccaaatatagtggtacctg 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3523 atccagatggaagatgcattagattattgactactgacgaaccaaatatagtggtacctg 3582
Query: 73 gtttctctttagaaagatgttctgaaagaaaagactcagatatatgttcgtggtccctgt 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3583 gtttctctttagaaagatgttctgaaagaaaagactcagatatatgttcgtggtccctgt 3642
Query: 133 cattagacgacggccttgatcagttgacaatcaagaggaatagaagaaaagatgggcttg 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3643 cattagacgacggccttgatcagttgacaatcaagaggaatagaagaaaagatgggcttg 3702
Query: 193 aatttaacgagatcttgaaaatctcaaacagaggtcacaagaagttcagcaagttgaaat 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3703 aatttaacgagatcttgaaaatctcaaacagaggtcacaagaagttcagcaagttgaaat 3762
Query: 253 ggattgcttcttctgcaacgaggcaagacggcacaacaatgcagttctcattgagcaaag 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3763 ggattgcttcttctgcaacgaggcaagacggcacaacaatgcagttctcattgagcaaag 3822
Query: 313 aaaaaccatttcatttctcgaaggcgaagtcataccgtgactgctagatcagggctgtca 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3823 aaaaaccatttcatttctcgaaggcgaagtcataccgtgactgctagatcagggctgtca 3882
Query: 373 tatttgattactataacagccagagagctgtacttccatcacgactaatgagtggatact 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3883 tatttgattactataacagccagagagctgtacttccatcacgactaatgagtggatact 3942
Query: 433 tgtagctcgcgcgatgctaagtgatagacgatatacgagaaaagcccgttcacgtgatat 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3943 tgtagctcgcgcgatgctaagtgatagacgatatacgagaaaagcccgttcacgtgatat 4002
Query: 493 cttcttacacgtgactttaaatcctctccatgtgaaaatgtccagagcgtccggatttca 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4003 cttcttacacgtgactttaaatcctctccatgtgaaaatgtccagagcgtccggatttca 4062
Query: 553 atagaaactgacgaaaagctcgattaccggaaaacatcacagagtacatcttagtttata 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4063 atagaaactgacgaaaagctcgattaccggaaaacatcacagagtacatcttagtttata 4122
Query: 613 gtaaggtccaacaatgtaatgtgaatgaattattggaggtgcgttgcagaaaaacatata 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4123 gtaaggtccaacaatgtaatgtgaatgaattattggaggtgcgttgcagaaaaacatata 4182
Query: 673 gccattgagtgatataagttgctatatcgagttattacagcgttgactattagctggact 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4183 gccattgagtgatataagttgctatatcgagttattacagcgttgactattagctggact 4242
Query: 733 attagatctgcggagtttgatatatgagtgcatggagattcgaggtacaagtatacctag 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4243 attagatctgcggagtttgatatatgagtgcatggagattcgaggtacaagtatacctag 4302
Query: 793 atttgttgcgtttgatagatttataaagtacccatctaattataaaagggtattttggac 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4303 atttgttgcgtttgatagatttataaagtacccatctaattataaaagggtattttggac 4362
Query: 853 gcaggcaaacatttagacatttaactattcgcgtggagtgttcagtagcaatacagatct 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4363 gcaggcaaacatttagacatttaactattcgcgtggagtgttcagtagcaatacagatct 4422
Query: 913 taaccgattttctgaaaatacaatggaagctcaaagcc-aggtggcctcggttctctgtt 971
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4423 taaccgattttctgaaaatacaatggaagctcaaagccaaggtggcctcggttctctgtt 4482
Query: 972 ggacatggatttggaaggtt 991
||||||||||||||||||||
Sbjct: 4483 ggacatggatttggaaggtt 4502
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6823
Number of Sequences: 1807
Number of extensions: 6823
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 1003
length of database: 10,358,551
effective HSP length: 16
effective length of query: 987
effective length of database: 10,329,639
effective search space: 10195353693
effective search space used: 10195353693
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)